C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497500 NUPL2-007 ENSG00000136243 9606 + 7:23182038-23187392 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryENST00000497500
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary
ENST00000497500 1.132±0.00 4.176±0.00 2.546±0.00 1.981±0.00 0.726±0.00 1.267±0.00 1.166±0.00 0.855±0.00 4.315±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022N CIL_00022N_0001 CGP 7:23105758-23201011

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049887 Nupl2-001 protein_coding Mus_musculus 0 361
ENSMUST00000115101 Nupl2-002 nonsense_mediated_decay Mus_musculus 0 359
ENSMUST00000147392 Nupl2-003 retained_intron Mus_musculus 6.02558e-44 182

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