C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD50 interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497979 RINT1-008 ENSG00000135249 9606 + 7:105532212-105567676 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000497979
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000497979 1.391±0.00 4.715±0.00 1.227±0.00 1.215±0.25 1.610±0.00 1.745±0.00 1.742±0.00 2.557±0.00 3.874±0.00 1.157±0.09 2.465±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040X CIL_00040X_0001 CGP 7:105439661-105567677

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030852 Rint1-001 protein_coding Mus_musculus 0 2137
ENSMUST00000115113 Rint1-002 protein_coding Mus_musculus 0 1812
ENSMUST00000124680 Rint1-003 retained_intron Mus_musculus 0 1382
ENSMUST00000132260 Rint1-007 retained_intron Mus_musculus 0 459

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