C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | homeobox B3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000498678  |
HOXB3-002 |
ENSG00000120093 |
9606 | - |
17:48550006-48590272  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007ZM | CIL_0007ZM_0001 | VISTA | 17:48304888-48905406 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001525 | IEP | angiogenesis |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000093944
|
Hoxb3-002 | protein_coding | Mus_musculus | 0 | 2207 |
|
ENSMUST00000055334
|
Hoxb3-001 | protein_coding | Mus_musculus | 0 | 1949 |
|
ENSMUST00000123091
|
Hoxb3-003 | protein_coding | Mus_musculus | 0 | 416 |
|
ENSMUST00000053932
|
HOXD3-001 | nonsense_mediated_decay | Mus_musculus | 0 | 268 |
|
ENSMUST00000190553
|
Hoxd3-008 | retained_intron | Mus_musculus | 0 | 268 |
|
ENSMUST00000140666
|
Hoxd3-007 | protein_coding | Mus_musculus | 0 | 268 |
|
ENSMUST00000047830
|
Hoxd3-005 | protein_coding | Mus_musculus | 0 | 268 |
|
ENSMUST00000111982
|
Hoxd3-004 | protein_coding | Mus_musculus | 0 | 268 |
|
ENSMUST00000111983
|
Hoxd3-001 | protein_coding | Mus_musculus | 0 | 268 |
|
ENSMUST00000143462
|
Hoxb3-004 | processed_transcript | Mus_musculus | 4e-35 | 154 |
|
ENSMUST00000123805
|
Hoxb1-002 | processed_transcript | Mus_musculus | 0.00000000000005 | 84 |
|
ENSMUST00000019117
|
Hoxb1-001 | protein_coding | Mus_musculus | 0.00000000000005 | 84 |
