C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tetraspanin 17 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000503045  |
TSPAN17-008 |
ENSG00000048140 |
9606 | + |
5:176647561-176657732  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00098R | CIL_00098R_0001 | VISTA | 5:176349731-176951529 |
| CIL_0002NB | CIL_0002NB_0001 | CGP | 5:176630682-176659054 |
| CIL_0002NA | CIL_0002NA_0001 | CGP | 5:176647387-176880895 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000171859
|
Tspan17-008 | protein_coding | Mus_musculus | 0 | 601 |
|
ENSMUST00000099503
|
Tspan17-009 | protein_coding | Mus_musculus | 0 | 599 |
|
ENSMUST00000145574
|
Tspan17-003 | protein_coding | Mus_musculus | 0 | 551 |
|
ENSMUST00000131692
|
Tspan17-002 | protein_coding | Mus_musculus | 0 | 547 |
|
ENSMUST00000026993
|
Tspan17-001 | protein_coding | Mus_musculus | 0 | 545 |
|
ENSMUST00000163796
|
Tspan17-007 | protein_coding | Mus_musculus | 0 | 497 |
|
ENSMUST00000130568
|
Tspan17-005 | protein_coding | Mus_musculus | 0 | 448 |
|
ENSMUST00000139574
|
Tspan17-004 | retained_intron | Mus_musculus | 0 | 265 |
|
ENSDART00000101132
|
TSPAN17-201 | protein_coding | Danio_rerio | 0 | 243 |
|
ENSDART00000075178
|
tspan5a-201 | protein_coding | Danio_rerio | 0 | 239 |
|
ENSDART00000126739
|
tspan5a-202 | protein_coding | Danio_rerio | 0 | 239 |
|
ENSMUST00000163915
|
Tspan17-006 | protein_coding | Mus_musculus | 2e-34 | 150 |
