C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002NB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175766-ENSG00000048140 CGP 9606 5:176630682-176659054
GeneTranscriptPositionBiotype
ENSG00000048140 (TSPAN17)
tetraspanin 17 		ENST00000298564 (TSPAN17-009) 176647467-176659054 protein_coding
ENST00000310032 (TSPAN17-001) 176647387-176659020 protein_coding
ENST00000503030 (TSPAN17-005) 176647502-176657618 nonsense_mediated_decay
ENST00000503045 (TSPAN17-008) 176647561-176657732 protein_coding
ENST00000504168 (TSPAN17-007) 176647505-176656956 protein_coding
ENST00000507471 (TSPAN17-006) 176647620-176657056 protein_coding
ENST00000508164 (TSPAN17-003) 176647502-176659051 protein_coding
ENST00000514705 (TSPAN17-004) 176647497-176659053 retained_intron
ENST00000515708 (TSPAN17-002) 176647568-176659053 protein_coding
ENSG00000175766 (EIF4E1B)
eukaryotic translation initiation factor 4E family member 1B 		ENST00000318682 (EIF4E1B-201) 176630682-176646641 protein_coding
ENST00000503895 (EIF4E1B-006) 176642928-176645300 retained_intron
ENST00000504597 (EIF4E1B-001) 176641672-176646607 protein_coding
ENST00000505497 (EIF4E1B-008) 176643245-176645981 protein_coding
ENST00000510473 (EIF4E1B-005) 176630682-176642737 processed_transcript
ENST00000510660 (EIF4E1B-003) 176630955-176643708 protein_coding
ENST00000512734 (EIF4E1B-007) 176644580-176646140 processed_transcript
ENST00000515458 (EIF4E1B-002) 176630955-176646641 retained_intron
CIL_0002NB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074895-ENSMUSG00000025875 CGP 10090 13:54783998-54796776
GeneTranscriptPositionBiotype
ENSMUSG00000025875 (Tspan17)
tetraspanin 17 		ENSMUST00000026993 (Tspan17-001) 54789377-54796776 protein_coding
ENSMUST00000099503 (Tspan17-009) 54789595-54796222 protein_coding
ENSMUST00000130568 (Tspan17-005) 54792740-54796165 protein_coding
ENSMUST00000131692 (Tspan17-002) 54789403-54796768 protein_coding
ENSMUST00000139574 (Tspan17-004) 54795384-54796768 retained_intron
ENSMUST00000145574 (Tspan17-003) 54792871-54796775 protein_coding
ENSMUST00000163796 (Tspan17-007) 54789463-54796187 protein_coding
ENSMUST00000163915 (Tspan17-006) 54789595-54796118 protein_coding
ENSMUST00000171859 (Tspan17-008) 54789645-54795148 protein_coding
ENSMUSG00000074895 (Eif4e1b)
eukaryotic translation initiation factor 4E family member 1B 		ENSMUST00000110003 (Eif4e1b-001) 54784013-54788451 protein_coding
ENSMUST00000126525 (Eif4e1b-006) 54784003-54787376 nonsense_mediated_decay
ENSMUST00000126785 (Eif4e1b-009) 54784001-54787469 protein_coding
ENSMUST00000132005 (Eif4e1b-008) 54784001-54787375 protein_coding
ENSMUST00000132415 (Eif4e1b-010) 54784001-54786863 protein_coding
ENSMUST00000132728 (Eif4e1b-004) 54784003-54788459 protein_coding
ENSMUST00000139184 (Eif4e1b-003) 54784001-54786653 protein_coding
ENSMUST00000141398 (Eif4e1b-005) 54784003-54787384 protein_coding
ENSMUST00000142158 (Eif4e1b-007) 54783998-54787375 protein_coding
ENSMUST00000152204 (Eif4e1b-002) 54784020-54787476 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002NB_0001ENSG00000048140ENST00000298564ENST00000310032ENST00000503030ENST00000503045ENST00000504168ENST00000507471ENST00000508164ENST00000514705ENST00000515708ENSG00000175766ENST00000318682ENST00000503895ENST00000504597ENST00000505497ENST00000510473ENST00000510660ENST00000512734ENST00000515458CIL_0002NB_0002ENSMUSG00000025875ENSMUST00000026993ENSMUST00000099503ENSMUST00000130568ENSMUST00000131692ENSMUST00000139574ENSMUST00000145574ENSMUST00000163796ENSMUST00000163915ENSMUST00000171859ENSMUSG00000074895ENSMUST00000110003ENSMUST00000126525ENSMUST00000126785ENSMUST00000132005ENSMUST00000132415ENSMUST00000132728ENSMUST00000139184ENSMUST00000141398ENSMUST00000142158ENSMUST00000152204
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002NB_0001ENSG00000048140ENST00000298564ENST00000310032ENST00000504168ENST00000507471ENST00000508164ENST00000514705ENST00000515708ENSG00000175766ENST00000318682ENST00000504597ENST00000505497ENST00000512734ENST00000515458CIL_0002NB_0002ENSMUSG00000025875ENSMUST00000026993ENSMUST00000099503ENSMUST00000130568ENSMUST00000131692ENSMUST00000139574ENSMUST00000145574ENSMUST00000163796ENSMUST00000171859ENSMUSG00000074895ENSMUST00000110003ENSMUST00000126525ENSMUST00000126785ENSMUST00000132005ENSMUST00000132415ENSMUST00000132728ENSMUST00000139184ENSMUST00000142158
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000048140 ENST00000298564 1.002±0.00 N/A N/A 1.496±0.00 N/A 2.479±0.00 N/A N/A N/A 2.917±0.00 N/A 3.557±0.00 1.186±0.33 2.578±0.00
ENST00000310032 N/A N/A 0.235±0.00 N/A N/A N/A 0.233±0.00 N/A N/A 3.217±0.00 N/A N/A N/A N/A
ENST00000503030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504168 N/A N/A N/A N/A N/A N/A N/A N/A 1.517±0.00 N/A N/A N/A N/A N/A
ENST00000507471 N/A N/A N/A N/A N/A N/A N/A 2.044±0.00 N/A N/A N/A N/A N/A N/A
ENST00000508164 4.901±0.00 3.245±0.00 0.147±0.00 2.846±2.17 3.370±2.49 2.698±1.32 2.807±0.00 4.486±3.65 1.769±0.00 1.670±1.11 5.317±0.00 3.323±2.22 7.378±3.42 6.196±1.39
ENST00000514705 N/A N/A 0.324±0.00 0.479±0.00 N/A N/A 0.086±0.00 0.268±0.00 N/A N/A 0.282±0.00 0.944±0.08 N/A N/A
ENST00000515708 1.878±0.00 2.943±0.00 N/A 1.580±0.00 N/A N/A 1.659±0.80 N/A 1.181±0.13 1.852±0.80 2.924±0.00 3.580±1.44 1.488±0.01 2.444±0.00
ENSG00000175766 ENST00000318682 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 0.051±0.00 0.165±0.00
ENST00000505497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 0.260±0.00
ENST00000510473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512734 N/A N/A N/A N/A N/A N/A N/A 0.297±0.00 N/A 0.427±0.00 N/A N/A 0.080±0.00 0.177±0.13
ENST00000515458 N/A N/A N/A 0.103±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025875 ENSMUST00000026993 16.222±7.90 8.478±1.96 9.742±1.60 2.984±1.04 6.812±2.18 5.469±1.55 1.799±0.42 2.498±0.44 0.392±0.24 12.017±1.55 5.753±0.86 5.075±1.45 1.479±0.90 4.812±2.04
ENSMUST00000099503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.631±1.67 N/A N/A
ENSMUST00000130568 N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.05 N/A 3.276±0.68 N/A 1.934±0.00 N/A
ENSMUST00000131692 7.034±0.00 4.046±0.00 N/A N/A 3.833±0.00 N/A N/A 0.707±0.00 0.127±0.05 N/A 1.698±0.00 N/A 0.291±0.00 N/A
ENSMUST00000139574 N/A N/A N/A 8.619±0.00 N/A N/A N/A 3.337±0.22 0.611±0.12 N/A N/A N/A 3.207±2.27 3.292±0.00
ENSMUST00000145574 14.277±3.29 N/A N/A 4.677±0.00 4.346±0.00 N/A 1.145±0.00 N/A 0.139±0.03 N/A 2.849±0.52 9.947±0.58 0.669±0.00 N/A
ENSMUST00000163796 N/A 9.280±1.51 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171859 N/A N/A N/A 11.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.907±0.00 N/A
ENSMUSG00000074895 ENSMUST00000110003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.434±0.31 N/A 0.100±0.03
ENSMUST00000126525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.337±0.00 N/A 0.193±0.00
ENSMUST00000126785 N/A N/A 0.055±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 3.240±0.00 N/A 0.203±0.00
ENSMUST00000132005 N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.00
ENSMUST00000132415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.198±0.00 N/A N/A
ENSMUST00000132728 N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A 0.043±0.02 1.520±0.53 N/A 0.169±0.00
ENSMUST00000139184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.00
ENSMUST00000141398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142158 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.898±3.21 N/A N/A
ENSMUST00000152204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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