C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 60kDa protein 1 (chaperonin) pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503199 HSPD1P1-001 ENSG00000213430 9606 + 5:21882585-21884310 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000503199
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000503199 0.031±0.00 0.019±0.00 0.021±0.01 0.015±0.00 0.028±0.00 0.006±0.00 0.037±0.00 0.032±0.01 0.011±0.00 0.039±0.02 0.019±0.00 0.036±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027123 Hspd1-001 protein_coding Mus_musculus 0 2170
ENSMUST00000119713 Gm12141-001 processed_pseudogene Mus_musculus 0 2150
ENSMUST00000121815 Gm12725-001 processed_pseudogene Mus_musculus 0 1722
ENSMUST00000189810 RP24-292D18.1-001 processed_pseudogene Mus_musculus 0 1500
ENSMUST00000122013 Gm12608-001 processed_pseudogene Mus_musculus 0 1410
ENSMUST00000121528 Gm14935-001 processed_pseudogene Mus_musculus 0 1195
ENSMUST00000189212 RP23-274N9.1-001 processed_pseudogene Mus_musculus 0 933
ENSMUST00000127861 Hspd1-002 protein_coding Mus_musculus 0 806
ENSMUST00000169520 Gm17101-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000118299 Gm12667-001 processed_pseudogene Mus_musculus 0 340

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