C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium channel tetramerization domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503687 KCTD7-004 ENSG00000243335 9606 + 7:66628958-66811187 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024I CIL_00024I_0001 CGP 7:66205199-66811187
CIL_0005UP CIL_0005UP_0001 CGP 7:66628881-66811464

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026390 Rabgef1-002 protein_coding Mus_musculus 0 1133
ENSMUST00000119797 Rabgef1-001 protein_coding Mus_musculus 0 1133
ENSMUST00000147493 Rabgef1-007 retained_intron Mus_musculus 0 501
ENSMUST00000119027 Rabgef1-004 protein_coding Mus_musculus 0 483
ENSMUST00000148264 Rabgef1-003 protein_coding Mus_musculus 0 483
ENSMUST00000040616 Kctd7-001 protein_coding Mus_musculus 0 379
ENSMUST00000160428 Gm16167-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000143727 Rabgef1-005 retained_intron Mus_musculus 0 268
ENSMUST00000144878 Kctd7-002 processed_transcript Mus_musculus 0 261
ENSMUST00000144467 Kctd7-003 protein_coding Mus_musculus 0 215

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