C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUB1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504016 SUB1-015 ENSG00000113387 9606 + 5:32588537-32601342 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungTestisENST00000504016
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Testis
ENST00000504016 32.685±0.00 45.201±0.00 23.870±0.00 18.615±0.00 24.708±0.00 15.260±0.00 28.159±0.00 37.401±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SE CIL_0002SE_0002 CGP 5:32354350-32604079
CIL_000211 CIL_000211_0002 CGP 5:32531633-32791724

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022816 Sub1-001 protein_coding Mus_musculus 0 298
ENSMUST00000110504 Sub1-002 protein_coding Mus_musculus 0 255
ENSMUST00000121603 Gm2986-001 processed_pseudogene Mus_musculus 3e-20 102

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