C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000211_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007720-ENSDARG00000035253 CGP 7955 5:42762145-42926132
GeneTranscriptPositionBiotype
ENSDARG00000007720 (sub1b)
SUB1 homolog b (S. cerevisiae)
ENSDART00000011229 (sub1b-001) 42762145-42769912 protein_coding
ENSDARG00000035253 (npr3)
natriuretic peptide receptor 3
ENSDART00000143446 (npr3-001) 42879060-42926132 protein_coding
ENSDARG00000093616 (si:dkey-199l1.1)
si:dkey-199l1.1
ENSDART00000137545 (si:dkey-199l1.1-002) 42818040-42871448 processed_transcript
ENSDART00000140497 (si:dkey-199l1.1-001) 42818043-42870310 processed_transcript
CIL_000211_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113387-ENSG00000113389 CGP 9606 5:32531633-32791724
GeneTranscriptPositionBiotype
ENSG00000113387 (SUB1)
SUB1 homolog (S. cerevisiae)
ENST00000265073 (SUB1-001) 32585499-32604079 protein_coding
ENST00000502453 (SUB1-005) 32594923-32601130 retained_intron
ENST00000502897 (SUB1-007) 32585588-32601150 protein_coding
ENST00000504016 (SUB1-015) 32588537-32601342 processed_transcript
ENST00000504789 (SUB1-008) 32585887-32601257 processed_transcript
ENST00000506237 (SUB1-011) 32531633-32601323 protein_coding
ENST00000510442 (SUB1-009) 32585600-32591687 protein_coding
ENST00000511175 (SUB1-014) 32591248-32601093 retained_intron
ENST00000511615 (SUB1-004) 32585559-32601988 nonsense_mediated_decay
ENST00000511988 (SUB1-010) 32586114-32591685 retained_intron
ENST00000512913 (SUB1-012) 32531818-32601200 protein_coding
ENST00000513013 (SUB1-013) 32531849-32601055 processed_transcript
ENST00000515355 (SUB1-006) 32585571-32601282 protein_coding
ENSG00000113389 (NPR3)
natriuretic peptide receptor 3
ENST00000265074 (NPR3-001) 32711434-32791720 protein_coding
ENST00000326958 (NPR3-201) 32710637-32791724 protein_coding
ENST00000415167 (NPR3-006) 32711723-32786421 protein_coding
ENST00000434067 (NPR3-002) 32709407-32786826 protein_coding
ENST00000506712 (NPR3-003) 32710654-32783607 retained_intron
ENST00000507141 (NPR3-005) 32712331-32716828 protein_coding
ENST00000509104 (NPR3-004) 32689070-32783028 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000211_0001ENSDARG00000007720ENSDART00000011229ENSDARG00000035253ENSDART00000143446ENSDARG00000093616ENSDART00000137545ENSDART00000140497CIL_000211_0002ENSG00000113387ENST00000265073ENST00000502453ENST00000502897ENST00000504016ENST00000504789ENST00000506237ENST00000510442ENST00000511175ENST00000511615ENST00000511988ENST00000512913ENST00000513013ENST00000515355ENSG00000113389ENST00000265074ENST00000326958ENST00000415167ENST00000434067ENST00000506712ENST00000507141ENST00000509104
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000211_0001ENSDARG00000007720ENSDART00000011229ENSDARG00000035253ENSDART00000143446ENSDARG00000093616ENSDART00000137545ENSDART00000140497CIL_000211_0002ENSG00000113387ENST00000265073ENST00000502453ENST00000502897ENST00000504016ENST00000504789ENST00000506237ENST00000511615ENST00000515355ENSG00000113389ENST00000265074ENST00000326958ENST00000415167ENST00000506712
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007720 ENSDART00000011229 N/A N/A N/A 110.123±27.66 N/A N/A 63.186±12.63 30.598±3.66 1.912±0.00 N/A 21.696±0.00 N/A N/A N/A
ENSDARG00000035253 ENSDART00000143446 N/A N/A N/A 2.612±1.76 N/A N/A 12.204±6.36 1.026±0.38 N/A N/A 0.412±0.00 N/A N/A N/A
ENSDARG00000093616 ENSDART00000137545 N/A N/A N/A 0.326±0.00 N/A N/A 0.577±0.55 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140497 N/A N/A N/A 0.276±0.04 N/A N/A N/A 0.183±0.00 0.116±0.00 N/A 0.511±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113387 ENST00000265073 6.940±0.00 10.061±0.00 2.547±0.00 35.035±3.14 14.174±2.50 7.644±0.48 8.141±0.98 5.717±1.64 7.082±3.93 7.013±0.57 4.591±0.78 10.783±1.64 7.487±2.80 8.076±1.53
ENST00000502453 N/A N/A 0.895±0.00 N/A N/A N/A N/A N/A N/A 1.474±0.00 N/A N/A N/A N/A
ENST00000502897 15.591±0.00 N/A N/A 36.558±0.00 48.303±19.23 24.143±3.81 9.890±0.00 23.716±0.67 12.908±0.00 30.611±0.00 N/A 26.008±0.00 N/A N/A
ENST00000504016 N/A 32.685±0.00 N/A N/A 45.201±0.00 23.870±0.00 18.615±0.00 24.708±0.00 15.260±0.00 28.159±0.00 N/A N/A N/A 37.401±0.00
ENST00000504789 25.157±0.00 32.270±0.00 N/A N/A N/A 36.639±0.00 34.515±0.00 51.553±0.00 30.678±0.00 55.803±0.00 16.226±0.00 79.987±8.45 42.355±9.19 42.204±10.05
ENST00000506237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.501±0.00 N/A N/A
ENST00000510442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511615 4.853±0.00 9.669±0.00 1.598±0.00 N/A N/A 5.423±0.00 N/A 3.447±0.00 N/A N/A N/A 18.024±6.97 6.967±1.66 9.628±1.03
ENST00000511988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515355 N/A N/A 5.216±0.00 N/A N/A N/A N/A N/A N/A 9.672±0.00 N/A N/A N/A N/A
ENSG00000113389 ENST00000265074 N/A 0.246±0.00 N/A 0.136±0.11 10.970±0.00 0.652±0.00 0.701±0.09 2.527±0.00 0.298±0.23 2.718±1.61 N/A 0.786±0.75 0.662±0.31 N/A
ENST00000326958 0.686±0.00 0.270±0.00 2.656±0.00 0.154±0.12 6.946±5.01 1.163±0.55 2.994±0.52 7.922±0.00 0.116±0.05 4.234±0.73 0.148±0.00 0.320±0.00 0.410±0.00 0.219±0.00
ENST00000415167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.687±0.00 N/A 0.323±0.00
ENST00000434067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506712 N/A N/A N/A N/A N/A 1.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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