C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2986
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121603 Gm2986-001 ENSMUSG00000083700 10090 + 5:93195798-93196179 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121603
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121603 0.467±0.14 0.844±0.22 1.800±0.93 0.378±0.09 0.910±1.09 0.261±0.18 0.501±0.23 0.564±0.26 0.298±0.12 0.753±0.34 0.503±0.25 0.699±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WJ CIL_0008WJ_0002 VISTA 5:92697267-93298294
CIL_0008OK CIL_0008OK_0002 VISTA 5:92831077-93435726
CIL_00069X CIL_00069X_0002 CGP 5:93093457-93206495

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265073 SUB1-001 protein_coding Homo_sapiens 0 387
ENST00000502453 SUB1-005 retained_intron Homo_sapiens 0 193
ENST00000502897 SUB1-007 protein_coding Homo_sapiens 0 387
ENST00000504016 SUB1-015 processed_transcript Homo_sapiens 3e-20 102
ENST00000504789 SUB1-008 processed_transcript Homo_sapiens 0 302
ENST00000506237 SUB1-011 protein_coding Homo_sapiens 0 387
ENST00000511175 SUB1-014 retained_intron Homo_sapiens 0 302
ENST00000511615 SUB1-004 nonsense_mediated_decay Homo_sapiens 0 191
ENST00000512913 SUB1-012 protein_coding Homo_sapiens 0 387
ENST00000513013 SUB1-013 processed_transcript Homo_sapiens 0 268
ENST00000515355 SUB1-006 protein_coding Homo_sapiens 0 387
ENST00000524415 SUB1P1-001 processed_pseudogene Homo_sapiens 0 339

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