C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PDZ and LIM domain 7 (enigma)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504380 PDLIM7-017 ENSG00000196923 9606 - 5:177483695-177484473 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000504380
Transcript ID Ovary Testis
ENST00000504380 7.866±5.27 8.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0002YE CIL_0002YE_0001 CGP 5:177456608-177497606
CIL_0002YF CIL_0002YF_0001 CGP 5:177483394-177511274

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046246 Pdlim7-001 protein_coding Mus_musculus 0 327
ENSMUST00000128910 Pdlim7-005 retained_intron Mus_musculus 0 327
ENSMUST00000153230 Pdlim7-006 retained_intron Mus_musculus 0 327
ENSMUST00000155098 Pdlim7-004 nonsense_mediated_decay Mus_musculus 0 327

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