C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type IV, alpha 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504541 COL4A5-010 ENSG00000188153 9606 + X:108692822-108696936 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungENST00000504541
Transcript ID Liver Lung
ENST00000504541 0.111±0.00 1.926±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000172 CIL_000172_0002 CGP X:108155607-108697545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen trimer

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130732 Col4a5-003 protein_coding Mus_musculus 0 444
ENSMUST00000112930 Col4a5-002 protein_coding Mus_musculus 0 444
ENSMUST00000112931 Col4a5-001 protein_coding Mus_musculus 0 444

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