C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506352 APBB2-012 ENSG00000163697 9606 - 4:40815617-41214615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartLungMuscleENST00000506352
Transcript ID Bladder Breast Heart Lung Muscle
ENST00000506352 4.813±0.00 1.668±0.00 0.782±0.00 2.594±0.00 0.872±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038T CIL_00038T_0001 CGP 4:40749897-41216714
CIL_00038S CIL_00038S_0001 CGP 4:40810027-41268455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160870 Apbb2-007 protein_coding Mus_musculus 0 3046
ENSMUST00000159512 Apbb2-003 protein_coding Mus_musculus 0 3031
ENSMUST00000162366 Apbb2-008 protein_coding Mus_musculus 0 3025
ENSMUST00000162349 Apbb2-004 protein_coding Mus_musculus 0 1709
ENSMUST00000087256 Apbb2-201 protein_coding Mus_musculus 0 1687
ENSMUST00000159786 Apbb2-001 protein_coding Mus_musculus 0 1681
ENSMUST00000162401 Apbb2-005 retained_intron Mus_musculus 0 1343
ENSMUST00000160185 Apbb2-006 retained_intron Mus_musculus 0 1328
ENSMUST00000160775 Apbb2-018 processed_transcript Mus_musculus 0 1155
ENSMUST00000162955 Apbb2-002 processed_transcript Mus_musculus 0 1155
ENSMUST00000161771 Apbb2-019 processed_transcript Mus_musculus 0 717
ENSMUST00000162382 Apbb2-014 protein_coding Mus_musculus 0 492
ENSMUST00000160063 Apbb2-017 protein_coding Mus_musculus 0 483
ENSMUST00000161879 Apbb2-016 protein_coding Mus_musculus 0 468
ENSMUST00000160103 Apbb2-011 protein_coding Mus_musculus 0 444
ENSMUST00000162994 Apbb2-009 protein_coding Mus_musculus 0 200
ENSMUST00000160054 Apbb2-020 retained_intron Mus_musculus 3.00018e-42 178
ENSMUST00000159357 Apbb2-015 protein_coding Mus_musculus 7e-34 150
ENSMUST00000161716 Apbb2-012 protein_coding Mus_musculus 4e-31 141

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