C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160775 Apbb2-018 ENSMUSG00000029207 10090 - 5:66301872-66337663 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMusclePlacentaENSMUST00000160775
Transcript ID Brain Muscle Placenta
ENSMUST00000160775 4.763±0.00 4.124±0.87 5.724±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038T CIL_00038T_0002 CGP 5:66259912-66618828
CIL_00038S CIL_00038S_0002 CGP 5:66298861-66687231

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295974 APBB2-002 protein_coding Homo_sapiens 0 1245
ENST00000502687 APBB2-031 retained_intron Homo_sapiens 0 424
ENST00000502841 APBB2-007 protein_coding Homo_sapiens 0 1247
ENST00000504305 APBB2-025 protein_coding Homo_sapiens 0 1125
ENST00000506352 APBB2-012 protein_coding Homo_sapiens 0 1155
ENST00000507831 APBB2-024 processed_transcript Homo_sapiens 0 496
ENST00000508593 APBB2-003 protein_coding Homo_sapiens 0 1245
ENST00000510670 APBB2-026 protein_coding Homo_sapiens 0 566
ENST00000510925 APBB2-030 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000512510 APBB2-029 protein_coding Homo_sapiens 0 634
ENST00000513140 APBB2-001 protein_coding Homo_sapiens 0 1225
ENST00000513493 APBB2-023 protein_coding Homo_sapiens 0 385
ENST00000513516 APBB2-027 protein_coding Homo_sapiens 0 507
ENST00000513611 APBB2-006 protein_coding Homo_sapiens 0 1245
ENST00000514094 APBB2-021 retained_intron Homo_sapiens 0 272
ENST00000514920 APBB2-028 protein_coding Homo_sapiens 0 549
ENST00000543538 APBB2-201 protein_coding Homo_sapiens 0 1247

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