C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161879 Apbb2-016 ENSMUSG00000029207 10090 - 5:66451995-66514830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000161879
Transcript ID Testis
ENSMUST00000161879 2.412±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038T CIL_00038T_0002 CGP 5:66259912-66618828
CIL_00038S CIL_00038S_0002 CGP 5:66298861-66687231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IGI neuron migration
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007411 IGI axon guidance
GO:0030198 IGI extracellular matrix organization
GO:0043065 IDA positive regulation of apoptotic process
GO:0043066 IGI negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295974 APBB2-002 protein_coding Homo_sapiens 0 468
ENST00000503264 APBB2-019 protein_coding Homo_sapiens 5e-33 145
ENST00000503503 APBB2-016 protein_coding Homo_sapiens 2e-22 110
ENST00000506352 APBB2-012 protein_coding Homo_sapiens 0 468
ENST00000508593 APBB2-003 protein_coding Homo_sapiens 0 468
ENST00000508676 APBB2-010 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000508707 APBB2-018 protein_coding Homo_sapiens 0 311
ENST00000509446 APBB2-020 protein_coding Homo_sapiens 0 379
ENST00000509475 APBB2-004 retained_intron Homo_sapiens 0 355
ENST00000513140 APBB2-001 protein_coding Homo_sapiens 0 468
ENST00000513611 APBB2-006 protein_coding Homo_sapiens 0 355

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