C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506389 DDX3YP3-001 ENSG00000251571 9606 + 4:103572089-103574082 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleTestisENST00000506389
Transcript ID Brain Muscle Testis
ENST00000506389 0.006±0.00 0.005±0.00 0.021±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000804 Ddx3x-001 protein_coding Mus_musculus 0 1927
ENSMUST00000045108 D1Pas1-001 protein_coding Mus_musculus 0 1467
ENSMUST00000091190 Ddx3y-001 protein_coding Mus_musculus 0 1254
ENSMUST00000188484 Ddx3y-002 nonsense_mediated_decay Mus_musculus 0 1210
ENSMUST00000149639 Ddx3x-005 retained_intron Mus_musculus 0 616
ENSMUST00000123096 Ddx3x-004 retained_intron Mus_musculus 0 483
ENSMUST00000153611 Ddx3x-003 retained_intron Mus_musculus 0 440
ENSMUST00000188182 Ddx3y-003 retained_intron Mus_musculus 0 353
ENSMUST00000153851 Ddx3x-002 processed_transcript Mus_musculus 0 200

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