C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 175, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506553 FAM175A-009 ENSG00000163322 9606 - 4:83462009-83485555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryPlacentaTestisENST00000506553
Transcript ID Colon Liver Ovary Placenta Testis
ENST00000506553 0.983±0.00 1.628±0.00 1.399±0.00 1.224±0.00 10.721±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JA CIL_0006JA_0001 CGP 4:83407343-83469735
CIL_0006J9 CIL_0006J9_0001 CGP 4:83455932-83523348
CIL_0006J8 CIL_0006J8_0001 CGP 4:83459517-83605875

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117364 Fam175a-006 protein_coding Mus_musculus 0 760
ENSMUST00000055245 Fam175a-001 protein_coding Mus_musculus 0 760
ENSMUST00000044535 Fam175a-003 nonsense_mediated_decay Mus_musculus 0 562
ENSMUST00000145707 Fam175a-004 retained_intron Mus_musculus 9e-36 156

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