C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006J8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163322-ENSG00000138678 CGP 9606 4:83459517-83605875
GeneTranscriptPositionBiotype
ENSG00000138678 (AGPAT9)
1-acylglycerol-3-phosphate O-acyltransferase 9 		ENST00000264409 (AGPAT9-002) 83536411-83605875 protein_coding
ENST00000395226 (AGPAT9-001) 83536108-83605875 protein_coding
ENST00000506766 (AGPAT9-007) 83535975-83544613 processed_transcript
ENST00000509044 (AGPAT9-004) 83598529-83605139 processed_transcript
ENST00000509412 (AGPAT9-005) 83536307-83544603 processed_transcript
ENST00000513683 (AGPAT9-003) 83588258-83595335 retained_intron
ENST00000514309 (AGPAT9-006) 83535914-83544613 processed_transcript
ENST00000611707 (AGPAT9-201) 83535914-83605872 protein_coding
ENSG00000163319 (MRPS18C)
mitochondrial ribosomal protein S18C 		ENST00000295491 (MRPS18C-001) 83455965-83462298 protein_coding
ENST00000505525 (MRPS18C-007) 83459620-83461236 retained_intron
ENST00000505719 (MRPS18C-005) 83456090-83461328 protein_coding
ENST00000507019 (MRPS18C-003) 83455983-83461423 protein_coding
ENST00000507349 (MRPS18C-006) 83456055-83461237 protein_coding
ENST00000509571 (MRPS18C-009) 83461193-83469735 processed_transcript
ENST00000509970 (MRPS18C-010) 83456083-83467504 protein_coding
ENST00000512375 (MRPS18C-002) 83455932-83459144 retained_intron
ENST00000514581 (MRPS18C-004) 83459672-83461235 retained_intron
ENSG00000163322 (FAM175A)
family with sequence similarity 175, member A 		ENST00000321945 (FAM175A-001) 83459517-83485181 protein_coding
ENST00000475656 (FAM175A-002) 83460945-83485103 nonsense_mediated_decay
ENST00000503217 (FAM175A-006) 83470274-83485100 protein_coding
ENST00000504777 (FAM175A-003) 83462075-83469901 retained_intron
ENST00000505489 (FAM175A-008) 83467454-83523348 protein_coding
ENST00000506553 (FAM175A-009) 83462009-83485555 protein_coding
ENST00000511801 (FAM175A-005) 83470203-83485103 nonsense_mediated_decay
ENST00000515303 (FAM175A-004) 83478808-83485065 protein_coding
ENST00000611288 (FAM175A-010) 83463723-83470333 protein_coding
ENSG00000213608 (SLC25A14P1)
solute carrier family 25 (mitochondrial carrier, brain), member 14 pseudogene 1 		ENST00000502867 (SLC25A14P1-001) 83477524-83478424 processed_pseudogene
ENSG00000239525 (RPL30P5)
ribosomal protein L30 pseudogene 5 		ENST00000494923 (RPL30P5-001) 83502699-83503034 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006J8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035234-ENSMUSG00000029314 CGP 10090 5:100805192-100899102
GeneTranscriptPositionBiotype
ENSMUSG00000029314 (Agpat9)
1-acylglycerol-3-phosphate O-acyltransferase 9 		ENSMUST00000031255 (Agpat9-002) 100846219-100899099 protein_coding
ENSMUST00000092990 (Agpat9-003) 100846364-100899102 protein_coding
ENSMUST00000112887 (Agpat9-001) 100846130-100899099 protein_coding
ENSMUST00000144623 (Agpat9-004) 100845713-100846810 protein_coding
ENSMUST00000145612 (Agpat9-005) 100846417-100846850 protein_coding
ENSMUSG00000077354 (Gm26286)
predicted gene, 26286 		ENSMUST00000104166 (Gm26286-201) 100831281-100831414 snoRNA
ENSMUSG00000087611 (4930458D05Rik)
RIKEN cDNA 4930458D05 gene 		ENSMUST00000142871 (4930458D05Rik-001) 100840797-100847167 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006J8_0001ENSG00000138678ENST00000264409ENST00000395226ENST00000506766ENST00000509044ENST00000509412ENST00000513683ENST00000514309ENST00000611707ENSG00000163319ENST00000295491ENST00000505525ENST00000505719ENST00000507019ENST00000507349ENST00000509571ENST00000509970ENST00000512375ENST00000514581ENSG00000163322ENST00000321945ENST00000475656ENST00000503217ENST00000504777ENST00000505489ENST00000506553ENST00000511801ENST00000515303ENST00000611288ENSG00000213608ENST00000502867ENSG00000239525ENST00000494923CIL_0006J8_0002ENSMUSG00000029314ENSMUST00000031255ENSMUST00000092990ENSMUST00000112887ENSMUST00000144623ENSMUST00000145612ENSMUSG00000077354ENSMUST00000104166ENSMUSG00000087611ENSMUST00000142871
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006J8_0001ENSG00000138678ENST00000264409ENST00000395226ENST00000513683ENST00000611707ENSG00000163319ENST00000295491ENST00000505719ENST00000507019ENST00000512375ENSG00000163322ENST00000321945ENST00000475656ENST00000506553ENSG00000213608ENST00000502867ENSG00000239525ENST00000494923CIL_0006J8_0002ENSMUSG00000029314ENSMUST00000031255ENSMUST00000092990ENSMUST00000112887ENSMUST00000144623ENSMUSG00000077354ENSMUST00000104166ENSMUSG00000087611ENSMUST00000142871
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138678 ENST00000264409 2.880±0.00 N/A 9.005±0.00 N/A N/A 4.509±2.93 4.652±3.17 0.970±0.73 0.418±0.00 N/A 5.194±1.40 1.548±0.63 N/A N/A
ENST00000395226 3.132±0.00 N/A 7.588±0.00 1.083±0.42 2.378±0.46 2.086±0.00 7.497±0.25 6.082±0.00 1.095±0.00 1.669±0.06 15.320±0.00 1.954±0.91 0.598±0.12 8.791±6.62
ENST00000506766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513683 N/A N/A N/A N/A N/A N/A N/A 1.570±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611707 N/A 0.964±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.300±0.00 0.301±0.00 1.958±0.00
ENSG00000163319 ENST00000295491 N/A N/A 1.923±0.00 N/A N/A N/A N/A 2.825±0.00 2.395±0.00 2.284±0.00 N/A N/A N/A N/A
ENST00000505525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505719 N/A N/A N/A N/A N/A N/A 6.305±0.00 N/A 5.018±0.00 N/A N/A N/A N/A N/A
ENST00000507019 N/A N/A N/A N/A N/A 3.456±0.00 N/A 1.938±0.00 N/A N/A 2.603±0.00 5.618±0.00 5.464±0.31 N/A
ENST00000507349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512375 N/A N/A N/A N/A 1.428±0.00 N/A N/A N/A N/A 0.983±0.00 N/A 0.913±0.00 N/A N/A
ENST00000514581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163322 ENST00000321945 1.650±0.00 N/A 0.889±0.00 N/A 0.825±0.00 N/A 0.906±0.00 0.604±0.19 N/A 0.588±0.00 1.988±0.00 2.868±0.09 N/A 2.321±0.00
ENST00000475656 4.588±0.00 3.692±0.00 N/A 1.687±0.00 3.023±0.02 2.911±1.20 1.411±0.50 1.475±1.08 N/A 2.051±0.12 3.468±2.74 4.063±2.48 1.363±0.05 7.234±1.22
ENST00000503217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506553 N/A N/A N/A N/A N/A 0.983±0.00 N/A N/A 1.628±0.00 N/A N/A 1.399±0.00 1.224±0.00 10.721±0.00
ENST00000511801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213608 ENST00000502867 N/A N/A 0.679±0.00 0.123±0.07 N/A 0.098±0.00 0.064±0.00 N/A 0.063±0.00 0.077±0.00 N/A 0.295±0.18 0.057±0.00 0.062±0.01
ENSG00000239525 ENST00000494923 N/A N/A N/A 0.084±0.00 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029314 ENSMUST00000031255 18.937±6.42 2.478±1.56 2.451±0.53 0.077±0.02 11.827±2.24 2.209±0.46 2.614±0.61 6.240±1.29 2.423±1.96 1.033±0.07 0.522±0.26 2.648±1.52 6.657±3.93 5.368±2.61
ENSMUST00000092990 4.980±1.53 1.143±0.45 0.805±0.13 0.131±0.08 2.936±0.61 0.911±0.17 0.995±0.19 1.475±0.33 0.765±0.39 0.513±0.18 0.439±0.10 1.020±0.54 3.540±0.90 5.442±1.99
ENSMUST00000112887 N/A 1.956±0.86 N/A N/A N/A 0.451±0.08 N/A N/A 0.184±0.00 N/A 0.391±0.00 0.652±0.07 N/A 4.223±1.73
ENSMUST00000144623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.703±0.00 N/A N/A N/A
ENSMUST00000145612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077354 ENSMUST00000104166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.689±0.00 N/A N/A
ENSMUSG00000087611 ENSMUST00000142871 N/A N/A 1.224±0.04 0.031±0.01 N/A 0.281±0.02 N/A 0.595±0.01 N/A 0.176±0.00 0.176±0.06 0.204±0.00 N/A 4.793±0.88

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