| Transcript ID | Liver | Lung | Muscle | Placenta |
|---|---|---|---|---|
| ENST00000506696 | 0.099±0.00 | 0.099±0.00 | 0.142±0.00 | 0.055±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synuclein, beta | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000506696  |
SNCB-003 |
ENSG00000074317 |
9606 | - |
5:176620785-176630000  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00098R | CIL_00098R_0001 | VISTA | 5:176349731-176951529 |
| CIL_0002ND | CIL_0002ND_0001 | CGP | 5:176595802-176630556 |
| CIL_0002NC | CIL_0002NC_0001 | CGP | 5:176620084-176646641 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004859 | TAS | phospholipase inhibitor activity |
| GO:0005509 | IDA | calcium ion binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005794 | IDA | Golgi apparatus |
| GO:0016234 | IDA | inclusion body |
| GO:0043086 | TAS | negative regulation of catalytic activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000134110
|
Sncb-004 | protein_coding | Mus_musculus | 0 | 617 |
|
ENSMUST00000036825
|
Sncb-001 | protein_coding | Mus_musculus | 0 | 564 |
|
ENSMUST00000153829
|
Sncb-002 | retained_intron | Mus_musculus | 0 | 351 |
|
ENSMUST00000138067
|
Sncb-003 | retained_intron | Mus_musculus | 0 | 215 |
