C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synuclein, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153829 Sncb-002 ENSMUSG00000034891 10090 - 13:54759428-54763067 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeTestisENSMUST00000153829
Transcript ID Adipose Testis
ENSMUST00000153829 0.072±0.00 0.443±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0002ND CIL_0002ND_0002 CGP 13:54736671-54766595
CIL_0002NC CIL_0002NC_0002 CGP 13:54758860-54788459

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310112 SNCB-001 protein_coding Homo_sapiens 0 381
ENST00000393693 SNCB-002 protein_coding Homo_sapiens 0 381
ENST00000506696 SNCB-003 protein_coding Homo_sapiens 0 351
ENST00000508006 SNCB-004 retained_intron Homo_sapiens 0 254
ENST00000510387 SNCB-005 protein_coding Homo_sapiens 0 381
ENST00000614675 SNCB-201 protein_coding Homo_sapiens 0 344

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