C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | histidyl-tRNA synthetase 2, mitochondrial | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000508522  |
HARS2-003 |
ENSG00000112855 |
9606 | + |
5:140691609-140698628  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006ZJ | CIL_0006ZJ_0001 | CGP | 5:140670794-140692024 |
| CIL_0006ZR | CIL_0006ZR_0001 | CGP | 5:140673173-140699291 |
| CIL_0006ZQ | CIL_0006ZQ_0001 | CGP | 5:140691426-140706676 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0004812 | IEA | aminoacyl-tRNA ligase activity |
| GO:0004821 | NAS:IEA | histidine-tRNA ligase activity |
| GO:0005524 | IEA | ATP binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0005759 | TAS | mitochondrial matrix |
| GO:0006412 | NAS | translation |
| GO:0006418 | TAS:IEA | tRNA aminoacylation for protein translation |
| GO:0006427 | IEA | histidyl-tRNA aminoacylation |
| GO:0010467 | TAS | gene expression |
| GO:0044822 | IDA | poly(A) RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000152954
|
Hars2-001 | protein_coding | Mus_musculus | 0 | 1450 |
|
ENSMUST00000001416
|
Hars-201 | protein_coding | Mus_musculus | 0 | 861 |
|
ENSMUST00000019287
|
Hars2-002 | protein_coding | Mus_musculus | 0 | 845 |
|
ENSMUST00000117660
|
Gm14890-001 | processed_pseudogene | Mus_musculus | 0 | 466 |
|
ENSMUST00000124204
|
Hars2-007 | retained_intron | Mus_musculus | 0 | 422 |
|
ENSMUST00000131952
|
Hars2-005 | retained_intron | Mus_musculus | 0 | 414 |
