C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510405 SPOCK1-006 ENSG00000152377 9606 - 5:137112435-137313538 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000510405
Transcript ID Lung
ENST00000510405 0.377±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P0 CIL_0005P0_0001 CGP 5:136213320-137598379
CIL_0005P1 CIL_0005P1_0001 CGP 5:136975298-137736090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185502 Spock1-002 protein_coding Mus_musculus 0 387
ENSMUST00000189373 Spock1-003 protein_coding Mus_musculus 0 387
ENSMUST00000172326 Spock1-201 protein_coding Mus_musculus 0 383
ENSMUST00000185905 Spock1-004 retained_intron Mus_musculus 0 383
ENSMUST00000186271 Spock1-005 protein_coding Mus_musculus 0 383
ENSMUST00000187852 Spock1-001 protein_coding Mus_musculus 0 383

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