C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synuclein, alpha interacting protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000512146  |
SNCAIP-008 |
ENSG00000064692 |
9606 | + |
5:122391135-122463496  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005KK | CIL_0005KK_0002 | CGP | 5:122311354-122830108 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000180259
|
Sncaip-009 | nonsense_mediated_decay | Mus_musculus | 0 | 1733 |
|
ENSMUST00000178883
|
Sncaip-007 | nonsense_mediated_decay | Mus_musculus | 0 | 1725 |
|
ENSMUST00000178011
|
Sncaip-005 | protein_coding | Mus_musculus | 0 | 1648 |
|
ENSMUST00000163742
|
Sncaip-004 | protein_coding | Mus_musculus | 0 | 1648 |
|
ENSMUST00000179625
|
Sncaip-011 | protein_coding | Mus_musculus | 0 | 1644 |
|
ENSMUST00000025413
|
Sncaip-003 | protein_coding | Mus_musculus | 0 | 1640 |
|
ENSMUST00000178678
|
Sncaip-001 | protein_coding | Mus_musculus | 0 | 1640 |
|
ENSMUST00000115410
|
Sncaip-002 | protein_coding | Mus_musculus | 0 | 1637 |
|
ENSMUST00000177861
|
Sncaip-008 | nonsense_mediated_decay | Mus_musculus | 0 | 1493 |
|
ENSMUST00000179689
|
Sncaip-010 | protein_coding | Mus_musculus | 0 | 1487 |
|
ENSDART00000109721
|
SNCAIP-201 | protein_coding | Danio_rerio | 9e-36 | 156 |
|
ENSMUST00000179038
|
Sncaip-012 | protein_coding | Mus_musculus | 0.000003 | 58 |
