C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000512780 STX18-005 ENSG00000168818 9606 - 4:4438439-4542031 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLungMuscleOvaryENST00000512780
Transcript ID Colon Heart Kidney Lung Muscle Ovary
ENST00000512780 4.572±0.00 1.391±0.00 1.847±0.00 3.891±0.00 0.556±0.00 4.866±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZA CIL_0008ZA_0001 VISTA 4:4157066-4757929
CIL_00096M CIL_00096M_0001 VISTA 4:4215001-4816750
CIL_0008QQ CIL_0008QQ_0001 VISTA 4:4221140-4822323
CIL_00096B CIL_00096B_0001 VISTA 4:4365944-4967466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031008 Stx18-005 protein_coding Mus_musculus 0 606
ENSMUST00000114126 Stx18-001 protein_coding Mus_musculus 0 606
ENSMUST00000042146 Stx18-004 protein_coding Mus_musculus 0 499
ENSMUST00000146864 Stx18-002 processed_transcript Mus_musculus 0 355
ENSMUST00000154929 Stx18-003 protein_coding Mus_musculus 0 274

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