| Transcript ID | Ovary | Placenta | Testis |
|---|---|---|---|
| ENSMUST00000154929 | 24.051±0.00 | 22.739±3.49 | 49.079±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | syntaxin 18 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000154929  |
Stx18-003 |
ENSMUSG00000029125 |
10090 | + |
5:38039283-38136272  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000967 | CIL_000967_0002 | VISTA | 5:37518652-38119645 |
| CIL_0008Y0 | CIL_0008Y0_0002 | VISTA | 5:37525669-38129220 |
| CIL_0008DJ | CIL_0008DJ_0002 | VISTA | 5:37551391-38152218 |
| CIL_000969 | CIL_000969_0002 | VISTA | 5:37601106-38202493 |
| CIL_00096C | CIL_00096C_0002 | VISTA | 5:37617742-38218594 |
| CIL_00096B | CIL_00096B_0002 | VISTA | 5:37667623-38269196 |
| CIL_0008QQ | CIL_0008QQ_0002 | VISTA | 5:37760247-38361421 |
| CIL_00096M | CIL_00096M_0002 | VISTA | 5:37765055-38366694 |
| CIL_0008ZA | CIL_0008ZA_0002 | VISTA | 5:37806142-38406996 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005484 | IEA | SNAP receptor activity |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000306200
|
STX18-001 | protein_coding | Homo_sapiens | 0 | 795 |
|
ENST00000503861
|
STX18-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 470 |
|
ENST00000505286
|
STX18-002 | protein_coding | Homo_sapiens | 0 | 785 |
|
ENST00000507908
|
STX18-004 | protein_coding | Homo_sapiens | 0 | 547 |
|
ENST00000512195
|
STX18-007 | protein_coding | Homo_sapiens | 0 | 558 |
|
ENST00000512780
|
STX18-005 | retained_intron | Homo_sapiens | 0 | 274 |
|
ENST00000583091
|
RP11-1148O4.1-001 | transcribed_processed_pseudogene | Homo_sapiens | 0 | 737 |
