C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipoic acid synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513731 LIAS-006 ENSG00000121897 9606 + 4:39459066-39477155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000513731
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000513731 1.072±0.00 1.130±0.00 2.294±0.00 1.136±0.00 2.192±0.00 1.417±0.70 0.649±0.00 1.298±0.00 3.643±0.13 0.545±0.03 0.863±0.00 2.493±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TV CIL_0002TV_0002 CGP 4:39454124-39477653
CIL_000278 CIL_000278_0002 CGP 4:39459000-39528311

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0009107 IEA lipoate biosynthetic process
GO:0016992 IEA lipoate synthase activity
GO:0051536 IEA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122026 Lias-003 protein_coding Mus_musculus 0 566
ENSMUST00000031101 Lias-001 protein_coding Mus_musculus 0 566
ENSMUST00000126036 Lias-004 retained_intron Mus_musculus 0 231
ENSMUST00000139847 Lias-002 retained_intron Mus_musculus 1.96182e-44 183

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