C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipoic acid synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122026 Lias-003 ENSMUSG00000029199 10090 + 5:65391541-65408950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122026
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122026 11.696±3.80 6.018±2.02 9.509±3.47 9.616±4.05 7.577±1.01 7.316±1.58 7.822±3.09 10.564±3.20 11.093±3.08 5.991±0.97 11.991±2.53 8.934±2.72 14.466±2.31 17.339±2.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TV CIL_0002TV_0003 CGP 5:65388364-65410693
CIL_000278 CIL_000278_0003 CGP 5:65391497-65435946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0005739 IDA mitochondrion
GO:0006954 IMP inflammatory response
GO:0006979 IMP response to oxidative stress
GO:0009107 IGI lipoate biosynthetic process
GO:0009249 IEA protein lipoylation
GO:0016992 IGI lipoate synthase activity
GO:0032496 IMP response to lipopolysaccharide
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261434 LIAS-001 protein_coding Homo_sapiens 0 1133
ENST00000340169 LIAS-008 protein_coding Homo_sapiens 1e-18 99
ENST00000381846 LIAS-002 protein_coding Homo_sapiens 0 446
ENST00000513731 LIAS-006 protein_coding Homo_sapiens 0 566

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