C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514014 RBM47-005 ENSG00000163694 9606 - 4:40425412-40630623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverENST00000514014
Transcript ID Bladder Brain Colon Kidney Liver
ENST00000514014 13.805±0.00 0.206±0.00 12.733±0.00 2.981±0.00 1.522±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038Q CIL_00038Q_0001 CGP 4:40423267-40809985

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167950 Rbm47-201 protein_coding Mus_musculus 0 2170
ENSMUST00000094757 Rbm47-004 protein_coding Mus_musculus 0 2170
ENSMUST00000113724 Rbm47-002 protein_coding Mus_musculus 0 2170
ENSMUST00000113726 Rbm47-001 protein_coding Mus_musculus 0 2170
ENSMUST00000094756 Rbm47-005 protein_coding Mus_musculus 0 2156
ENSMUST00000132606 Rbm47-007 retained_intron Mus_musculus 0 1275
ENSMUST00000113725 Rbm47-006 protein_coding Mus_musculus 0 1275

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