C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lymphoid enhancer-binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515500 LEF1-003 ENSG00000138795 9606 - 4:108081584-108166797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENST00000515500
Transcript ID Liver Ovary
ENST00000515500 0.977±0.00 1.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097H CIL_00097H_0001 VISTA 4:107841068-108442627
CIL_0008T5 CIL_0008T5_0001 VISTA 4:108033184-108635877

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008013 IEA beta-catenin binding
GO:0016055 IEA Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098611 Lef1-002 protein_coding Mus_musculus 0 726
ENSMUST00000029611 Lef1-001 protein_coding Mus_musculus 0 708
ENSMUST00000066849 Lef1-006 protein_coding Mus_musculus 0 562
ENSMUST00000106341 Lef1-004 protein_coding Mus_musculus 0 562
ENSMUST00000132737 Lef1-005 retained_intron Mus_musculus 0 462
ENSMUST00000136147 Lef1-003 retained_intron Mus_musculus 0 287

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