C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: signal peptide, CUB domain, EGF-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518447 SCUBE2-008 ENSG00000175356 9606 - 11:9020890-9022029 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverENST00000518447
Transcript ID Brain Kidney Liver
ENST00000518447 1.491±0.00 1.314±0.00 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q2 CIL_0008Q2_0001 VISTA 11:8432154-9033661
CIL_000498 CIL_000498_0001 CGP 11:8980576-9138114
CIL_000499 CIL_000499_0001 CGP 11:9020391-9265390

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132113 Scube2-002 processed_transcript Mus_musculus 0 403
ENSMUST00000106728 Scube2-003 protein_coding Mus_musculus 0 403
ENSMUST00000106729 Scube2-001 protein_coding Mus_musculus 0 403
ENSMUST00000007423 Scube2-004 protein_coding Mus_musculus 0 403

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