C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FCH and double SH3 domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165643 Fchsd1-002 ENSMUSG00000038524 10090 - 18:37957431-37960471 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLiverMuscleOvaryENSMUST00000165643
Transcript ID Adrenal Brain Breast Liver Muscle Ovary
ENSMUST00000165643 0.740±0.00 5.704±0.33 1.321±0.15 0.281±0.00 0.096±0.02 0.590±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QE CIL_0006QE_0002 CGP 18:37935844-37959179
CIL_0006QB CIL_0006QB_0002 CGP 18:37955079-37969774
CIL_0002P1 CIL_0002P1_0002 CGP 18:37957431-37997574

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297164 RELL2-001 protein_coding Homo_sapiens 0 363
ENST00000435817 FCHSD1-001 protein_coding Homo_sapiens 0 433
ENST00000444782 RELL2-201 protein_coding Homo_sapiens 0 270
ENST00000517794 RELL2-006 processed_transcript Homo_sapiens 0 246
ENST00000518025 RELL2-002 processed_transcript Homo_sapiens 0 263
ENST00000518856 RELL2-005 protein_coding Homo_sapiens 0 270
ENST00000520747 FCHSD1-006 retained_intron Homo_sapiens 0 433
ENST00000521367 RELL2-004 protein_coding Homo_sapiens 0 270
ENST00000522126 FCHSD1-003 nonsense_mediated_decay Homo_sapiens 6.02558e-44 183
ENST00000522783 FCHSD1-005 protein_coding Homo_sapiens 7.00649e-43 180
ENST00000523856 FCHSD1-004 processed_transcript Homo_sapiens 0 433

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