C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FCH and double SH3 domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043437 Fchsd1-001 ENSMUSG00000038524 10090 - 18:37957434-37969774 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043437
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043437 2.026±0.40 1.197±0.23 3.504±0.52 10.221±1.50 2.710±0.84 3.411±1.24 0.483±0.29 2.295±0.50 0.396±0.13 2.397±0.64 0.235±0.07 3.425±1.03 1.481±0.47 1.508±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QE CIL_0006QE_0002 CGP 18:37935844-37959179
CIL_0006QB CIL_0006QB_0002 CGP 18:37955079-37969774
CIL_0002P1 CIL_0002P1_0002 CGP 18:37957431-37997574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297164 RELL2-001 protein_coding Homo_sapiens 0 363
ENST00000435817 FCHSD1-001 protein_coding Homo_sapiens 0 2569
ENST00000444782 RELL2-201 protein_coding Homo_sapiens 0 270
ENST00000517794 RELL2-006 processed_transcript Homo_sapiens 0 246
ENST00000518025 RELL2-002 processed_transcript Homo_sapiens 0 263
ENST00000518499 FCHSD1-011 protein_coding Homo_sapiens 0 654
ENST00000518856 RELL2-005 protein_coding Homo_sapiens 0 270
ENST00000519800 FCHSD1-002 protein_coding Homo_sapiens 0 959
ENST00000520747 FCHSD1-006 retained_intron Homo_sapiens 0 433
ENST00000521367 RELL2-004 protein_coding Homo_sapiens 0 270
ENST00000522126 FCHSD1-003 nonsense_mediated_decay Homo_sapiens 0 2211
ENST00000522763 FCHSD1-010 processed_transcript Homo_sapiens 0 375
ENST00000522783 FCHSD1-005 protein_coding Homo_sapiens 0 1314
ENST00000523856 FCHSD1-004 processed_transcript Homo_sapiens 0 1247

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