C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522551 CTC-575D19.1-001 ENSG00000233913 9606 + 5:168616352-168616996 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000522551
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000522551 0.378±0.00 0.588±0.00 0.100±0.00 0.400±0.31 0.136±0.00 0.289±0.00 0.353±0.23 0.307±0.12 1.075±0.00 3.552±3.37 1.968±1.99 6.896±6.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 832
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 832
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 832
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 832
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 782
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 782
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 671
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 0 665
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 597
ENSMUST00000125775 Rpl10-005 retained_intron Mus_musculus 0 525
ENSMUST00000149171 Rpl10-004 processed_transcript Mus_musculus 0 508
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 420
ENSMUST00000121144 Gm11450-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000138954 Rpl10-006 retained_intron Mus_musculus 0 300
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000146584 Rpl10-010 retained_intron Mus_musculus 0 278

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