C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000524204  |
NPM1-012 |
ENSG00000181163 |
9606 | + |
5:171407493-171410884  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00088M | CIL_00088M_0001 | VISTA | 5:170856489-171457417 |
| CIL_00097F | CIL_00097F_0001 | VISTA | 5:170900986-171503014 |
| CIL_00092S | CIL_00092S_0001 | VISTA | 5:171022159-171623481 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000141881
|
Npm1-004 | processed_transcript | Mus_musculus | 0 | 577 |
|
ENSMUST00000093201
|
Npm1-006 | protein_coding | Mus_musculus | 0 | 564 |
|
ENSMUST00000075641
|
Npm1-001 | protein_coding | Mus_musculus | 0 | 564 |
|
ENSMUST00000164523
|
Gm5611-201 | protein_coding | Mus_musculus | 0 | 189 |
|
ENSMUST00000118047
|
Gm14681-001 | processed_pseudogene | Mus_musculus | 9.80909e-45 | 183 |
|
ENSMUST00000118871
|
Gm15484-001 | processed_pseudogene | Mus_musculus | 1.99965e-42 | 176 |
|
ENSMUST00000172394
|
Gm17060-001 | processed_pseudogene | Mus_musculus | 4e-35 | 152 |
|
ENSMUST00000120677
|
Gm12583-001 | processed_pseudogene | Mus_musculus | 2e-17 | 94 |
