C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SET binding factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526353 SBF2-004 ENSG00000133812 9606 - 11:9956568-9968356 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000526353
Transcript ID Breast
ENST00000526353 1.093±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CP CIL_0009CP_0001 VISTA 11:9311967-9915183
CIL_0004J8 CIL_0004J8_0001 CGP 11:9664077-10294207
CIL_0004J7 CIL_0004J7_0001 CGP 11:9778667-10307397

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086199 Glul-001 protein_coding Mus_musculus 0 822
ENSMUST00000120291 Glns-ps1-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000139476 Glul-005 protein_coding Mus_musculus 0 547
ENSMUST00000033058 Sbf2-201 protein_coding Mus_musculus 0 368
ENSMUST00000171378 Sbf2-004 retained_intron Mus_musculus 0 368
ENSMUST00000165449 Sbf2-003 retained_intron Mus_musculus 0 368
ENSMUST00000166020 Sbf2-002 protein_coding Mus_musculus 0 368
ENSMUST00000164759 Sbf2-001 protein_coding Mus_musculus 0 368
ENSMUST00000153134 Glul-003 processed_transcript Mus_musculus 0 322
ENSMUST00000154576 Glul-004 retained_intron Mus_musculus 0 287
ENSMUST00000135399 Usp16-007 retained_intron Mus_musculus 0.0000006 62

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