C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004J7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133812-ENSG00000148926 CGP 9606 11:9778667-10307397
GeneTranscriptPositionBiotype
ENSG00000133812 (SBF2)
SET binding factor 2 		ENST00000256190 (SBF2-001) 9778667-10294207 protein_coding
ENST00000420722 (SBF2-008) 9853707-9993104 protein_coding
ENST00000524961 (SBF2-011) 9812586-9819505 processed_transcript
ENST00000525040 (SBF2-006) 9779154-9787973 retained_intron
ENST00000525697 (SBF2-013) 9808574-9810472 processed_transcript
ENST00000526353 (SBF2-004) 9956568-9968356 retained_intron
ENST00000527019 (SBF2-007) 9993012-10044606 processed_transcript
ENST00000528478 (SBF2-012) 9795914-9812754 retained_intron
ENST00000529587 (SBF2-014) 9781548-9785349 retained_intron
ENST00000530741 (SBF2-009) 9808912-9839603 protein_coding
ENST00000532095 (SBF2-015) 9784933-9789204 protein_coding
ENST00000533584 (SBF2-010) 9812635-9829668 retained_intron
ENST00000533661 (SBF2-003) 10016468-10042990 retained_intron
ENST00000533770 (SBF2-002) 9838039-10193957 retained_intron
ENST00000617179 (SBF2-201) 9778667-10042981 protein_coding
ENSG00000148926 (ADM)
adrenomedullin 		ENST00000278175 (ADM-001) 10304680-10307397 protein_coding
ENST00000524948 (ADM-005) 10305077-10306260 protein_coding
ENST00000525063 (ADM-007) 10305088-10306908 protein_coding
ENST00000526492 (ADM-006) 10305088-10306530 protein_coding
ENST00000528544 (ADM-008) 10305377-10306112 protein_coding
ENST00000528655 (ADM-002) 10305084-10307355 protein_coding
ENST00000530439 (ADM-004) 10305074-10307362 protein_coding
ENST00000534464 (ADM-003) 10305073-10307395 protein_coding
ENSG00000252568 (RNU7-28P)
RNA, U7 small nuclear 28 pseudogene 		ENST00000516759 (RNU7-28P-201) 9843815-9843876 snRNA
ENSG00000254554 (RP11-351I24.1)
 ENST00000526906 (RP11-351I24.1-001) 10302657-10303704 antisense
ENSG00000254719 (RP11-351I24.3)
 ENST00000532615 (RP11-351I24.3-001) 10272052-10272259 processed_pseudogene
ENSG00000254865 (RP11-748C4.1)
 ENST00000532735 (RP11-748C4.1-001) 10149192-10165109 antisense
CIL_0004J7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038371-ENSMUSG00000030790 CGP 10090 7:110308013-110629820
GeneTranscriptPositionBiotype
ENSMUSG00000030790 (Adm)
adrenomedullin 		ENSMUST00000033054 (Adm-201) 110627669-110629819 protein_coding
ENSMUST00000185766 (Adm-002) 110628028-110628551 retained_intron
ENSMUST00000186620 (Adm-001) 110627661-110629820 protein_coding
ENSMUSG00000038371 (Sbf2)
SET binding factor 2 		ENSMUST00000033058 (Sbf2-201) 110308022-110614920 protein_coding
ENSMUST00000164525 (Sbf2-012) 110341327-110364586 protein_coding
ENSMUST00000164559 (Sbf2-011) 110422447-110442293 protein_coding
ENSMUST00000164599 (Sbf2-013) 110329933-110362145 protein_coding
ENSMUST00000164759 (Sbf2-001) 110308013-110614922 protein_coding
ENSMUST00000165449 (Sbf2-003) 110377256-110614914 retained_intron
ENSMUST00000165992 (Sbf2-009) 110320741-110340285 retained_intron
ENSMUST00000166020 (Sbf2-002) 110309398-110614761 protein_coding
ENSMUST00000166885 (Sbf2-010) 110441474-110462932 protein_coding
ENSMUST00000167652 (Sbf2-008) 110462876-110614761 nonsense_mediated_decay
ENSMUST00000167880 (Sbf2-006) 110425626-110614882 retained_intron
ENSMUST00000169740 (Sbf2-005) 110339184-110352241 retained_intron
ENSMUST00000171218 (Sbf2-007) 110441287-110614905 protein_coding
ENSMUST00000171378 (Sbf2-004) 110377567-110614896 retained_intron
ENSMUSG00000060777 (Gm10087)
predicted gene 10087 		ENSMUST00000167650 (Gm10087-001) 110526792-110527121 processed_pseudogene
ENSMUSG00000090855 (Gm17219)
predicted gene 17219 		ENSMUST00000168439 (Gm17219-001) 110522066-110522658 processed_pseudogene
ENSMUSG00000091117 (Gm9064)
predicted gene 9064 		ENSMUST00000163579 (Gm9064-001) 110425037-110425602 processed_pseudogene
ENSMUSG00000099803 (RP23-25I3.4)
predicted gene 28863 		ENSMUST00000186888 (RP23-25I3.4-001) 110626281-110639358 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004J7_0001ENSG00000133812ENST00000256190ENST00000420722ENST00000524961ENST00000525040ENST00000525697ENST00000526353ENST00000527019ENST00000528478ENST00000529587ENST00000530741ENST00000532095ENST00000533584ENST00000533661ENST00000533770ENST00000617179ENSG00000148926ENST00000278175ENST00000524948ENST00000525063ENST00000526492ENST00000528544ENST00000528655ENST00000530439ENST00000534464ENSG00000252568ENST00000516759ENSG00000254554ENST00000526906ENSG00000254719ENST00000532615ENSG00000254865ENST00000532735CIL_0004J7_0002ENSMUSG00000030790ENSMUST00000033054ENSMUST00000185766ENSMUST00000186620ENSMUSG00000038371ENSMUST00000033058ENSMUST00000164525ENSMUST00000164559ENSMUST00000164599ENSMUST00000164759ENSMUST00000165449ENSMUST00000165992ENSMUST00000166020ENSMUST00000166885ENSMUST00000167652ENSMUST00000167880ENSMUST00000169740ENSMUST00000171218ENSMUST00000171378ENSMUSG00000060777ENSMUST00000167650ENSMUSG00000090855ENSMUST00000168439ENSMUSG00000091117ENSMUST00000163579ENSMUSG00000099803ENSMUST00000186888
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004J7_0001ENSG00000133812ENST00000256190ENST00000525040ENST00000526353ENST00000533770ENST00000617179ENSG00000148926ENST00000278175ENST00000525063ENST00000526492ENST00000528655ENST00000530439ENST00000534464ENSG00000252568ENST00000516759ENSG00000254554ENST00000526906ENSG00000254719ENST00000532615ENSG00000254865ENST00000532735CIL_0004J7_0002ENSMUSG00000030790ENSMUST00000033054ENSMUST00000185766ENSMUST00000186620ENSMUSG00000038371ENSMUST00000033058ENSMUST00000164759ENSMUST00000166020ENSMUST00000171218ENSMUSG00000060777ENSMUST00000167650ENSMUSG00000090855ENSMUST00000168439ENSMUSG00000091117ENSMUST00000163579ENSMUSG00000099803ENSMUST00000186888
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133812 ENST00000256190 1.669±0.00 2.240±0.00 3.190±0.00 2.796±0.19 4.387±0.24 3.712±0.63 1.781±0.82 2.730±0.37 2.243±1.76 4.252±0.88 0.795±0.66 4.498±1.75 1.335±0.00 3.123±0.47
ENST00000420722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525040 N/A 5.700±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.291±0.00 5.535±0.00 2.740±0.00 N/A
ENST00000525697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526353 N/A N/A N/A N/A 1.093±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533770 N/A N/A 4.265±0.00 N/A 3.127±0.00 N/A 0.959±0.00 1.068±0.00 N/A N/A N/A 3.205±0.00 N/A N/A
ENST00000617179 N/A N/A N/A 1.761±0.00 N/A 4.013±0.00 1.057±0.00 1.424±0.00 0.429±0.00 N/A 1.679±0.00 2.576±0.00 2.492±0.92 1.900±0.30
ENSG00000148926 ENST00000278175 N/A N/A 0.487±0.00 0.560±0.00 N/A N/A 0.166±0.00 N/A N/A N/A N/A 3.528±3.01 18.588±0.00 N/A
ENST00000524948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525063 310.676±0.00 8.493±0.00 N/A N/A 30.692±28.19 40.059±37.95 2.349±1.31 2.087±0.00 6.127±0.00 51.985±50.90 13.546±12.58 11.130±8.51 101.085±51.92 3.660±2.47
ENST00000526492 N/A N/A N/A N/A 2.414±0.00 N/A N/A 3.528±2.77 N/A N/A 1.317±0.00 N/A N/A N/A
ENST00000528544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528655 N/A N/A 1.087±0.00 N/A 0.817±0.00 N/A N/A N/A N/A 1.262±0.00 N/A 0.934±0.00 33.199±0.00 N/A
ENST00000530439 N/A N/A 0.506±0.00 N/A 1.625±0.00 N/A N/A N/A 3.356±0.00 0.568±0.00 N/A 2.263±0.00 N/A 0.242±0.00
ENST00000534464 208.795±0.00 8.067±0.00 N/A 2.684±0.00 20.773±19.07 38.250±36.28 2.528±2.29 4.400±4.20 10.404±0.00 108.375±0.00 21.616±20.78 9.977±7.13 113.875±95.08 7.430±0.00
ENSG00000252568 ENST00000516759 N/A N/A N/A N/A N/A 3.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254554 ENST00000526906 0.284±0.00 0.112±0.00 1.318±0.00 N/A N/A 0.224±0.00 0.072±0.00 N/A 0.141±0.00 0.301±0.00 0.228±0.00 0.361±0.00 0.219±0.08 0.249±0.10
ENSG00000254719 ENST00000532615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.459±0.00 N/A
ENSG00000254865 ENST00000532735 N/A 0.021±0.00 N/A N/A N/A 0.037±0.00 0.769±0.75 0.040±0.00 N/A N/A N/A 0.086±0.00 N/A 0.560±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030790 ENSMUST00000033054 11.936±1.25 11.688±4.93 7.856±2.02 0.711±0.30 6.572±1.69 6.852±0.75 7.740±1.27 6.399±0.57 1.360±0.74 4.679±0.44 1.209±0.18 8.608±2.61 20.332±12.60 0.392±0.19
ENSMUST00000185766 N/A N/A N/A N/A N/A N/A N/A N/A 0.553±0.11 N/A N/A N/A N/A N/A
ENSMUST00000186620 N/A 3.430±0.00 1.804±0.00 N/A N/A N/A N/A N/A 0.934±0.24 N/A N/A 1.539±0.00 3.714±0.00 N/A
ENSMUSG00000038371 ENSMUST00000033058 N/A N/A 1.410±0.00 19.589±7.06 N/A N/A 1.322±0.21 2.733±0.73 N/A N/A 0.303±0.10 N/A 1.779±0.04 7.805±0.57
ENSMUST00000164525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164759 10.683±2.26 6.043±1.92 5.897±0.40 4.111±1.89 7.079±2.18 8.669±0.44 5.297±0.53 7.531±1.24 2.607±1.04 10.453±0.67 1.007±0.36 10.726±2.40 3.935±3.07 8.412±1.92
ENSMUST00000165449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166020 N/A N/A N/A 2.787±0.00 N/A N/A N/A N/A N/A N/A 0.369±0.00 2.311±1.09 1.400±0.08 3.787±0.00
ENSMUST00000166885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171218 N/A N/A N/A N/A N/A N/A N/A N/A 2.943±0.00 N/A N/A N/A N/A N/A
ENSMUST00000171378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060777 ENSMUST00000167650 N/A N/A N/A 0.601±0.00 N/A N/A 0.216±0.01 0.187±0.00 0.566±0.50 N/A N/A 0.469±0.27 0.304±0.00 0.411±0.18
ENSMUSG00000090855 ENSMUST00000168439 0.429±0.00 0.545±0.00 0.126±0.08 0.630±0.14 0.206±0.12 0.315±0.15 0.152±0.00 0.183±0.09 0.171±0.15 0.343±0.11 N/A 0.330±0.10 0.095±0.06 0.412±0.06
ENSMUSG00000091117 ENSMUST00000163579 N/A N/A 0.182±0.03 0.378±0.23 0.277±0.00 N/A 0.092±0.00 N/A 0.034±0.01 0.258±0.04 N/A 0.058±0.00 0.094±0.01 N/A
ENSMUSG00000099803 ENSMUST00000186888 0.131±0.00 N/A 0.030±0.00 N/A 0.181±0.00 0.308±0.10 N/A 0.199±0.04 N/A N/A N/A 0.375±0.11 0.221±0.07 0.188±0.07

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