C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphatidylserine synthase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526878 PTDSS2-003 ENSG00000174915 9606 + 11:458674-491399 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverENST00000526878
Transcript ID Breast Kidney Liver
ENST00000526878 0.117±0.00 0.039±0.00 0.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UP CIL_0002UP_0001 CGP 11:417933-491399
CIL_0003OS CIL_0003OS_0001 CGP 11:448268-507300

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026568 Ptdss2-001 protein_coding Mus_musculus 0 1574
ENSMUST00000174373 Ptdss2-006 nonsense_mediated_decay Mus_musculus 0 1062
ENSMUST00000174706 Ptdss2-002 retained_intron Mus_musculus 0 918
ENSMUST00000172787 Ptdss2-003 protein_coding Mus_musculus 0 754
ENSDART00000092023 ptdss2-001 protein_coding Danio_rerio 0 750
ENSMUST00000174612 Ptdss2-005 nonsense_mediated_decay Mus_musculus 0 309
ENSMUST00000173572 Ptdss2-007 processed_transcript Mus_musculus 0 270
ENSMUST00000173721 Ptdss2-008 processed_transcript Mus_musculus 0 267
ENSMUST00000174058 Ptdss2-004 nonsense_mediated_decay Mus_musculus 0 209

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