C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002UP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185101-ENSG00000174915 CGP 9606 11:417933-491399
GeneTranscriptPositionBiotype
ENSG00000174915 (PTDSS2)
phosphatidylserine synthase 2 		ENST00000308020 (PTDSS2-001) 450280-491387 protein_coding
ENST00000525059 (PTDSS2-002) 450354-461051 retained_intron
ENST00000525727 (PTDSS2-004) 450347-479445 retained_intron
ENST00000526558 (PTDSS2-014) 450420-459111 processed_transcript
ENST00000526878 (PTDSS2-003) 458674-491399 retained_intron
ENST00000527325 (PTDSS2-007) 487239-489730 retained_intron
ENST00000527479 (PTDSS2-012) 450451-479090 nonsense_mediated_decay
ENST00000528617 (PTDSS2-011) 450327-460879 processed_transcript
ENST00000530029 (PTDSS2-008) 489791-490720 retained_intron
ENST00000530087 (PTDSS2-013) 473920-480594 processed_transcript
ENST00000531411 (PTDSS2-010) 489350-490546 retained_intron
ENST00000531520 (PTDSS2-005) 450296-487470 nonsense_mediated_decay
ENST00000532614 (PTDSS2-006) 448268-487053 processed_transcript
ENSG00000185101 (ANO9)
anoctamin 9 		ENST00000332826 (ANO9-001) 418263-442011 protein_coding
ENST00000524802 (ANO9-008) 418541-419415 retained_intron
ENST00000525804 (ANO9-007) 420929-421286 retained_intron
ENST00000525857 (ANO9-006) 429543-430113 retained_intron
ENST00000526142 (ANO9-005) 417933-429758 retained_intron
ENST00000528927 (ANO9-004) 418192-441957 retained_intron
ENST00000532094 (ANO9-002) 417938-441996 retained_intron
ENST00000534161 (ANO9-003) 417935-429866 retained_intron
ENSG00000243562 (RN7SL838P)
RNA, 7SL, cytoplasmic 838, pseudogene 		ENST00000481676 (RN7SL838P-201) 440399-440693 misc_RNA
ENSG00000255237 (RP13-317D12.3)
 ENST00000525893 (RP13-317D12.3-001) 462930-463899 antisense
CIL_0002UP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054662-ENSMUSG00000025495 CGP 10090 7:141101219-141157021
GeneTranscriptPositionBiotype
ENSMUSG00000025495 (Ptdss2)
phosphatidylserine synthase 2 		ENSMUST00000026568 (Ptdss2-001) 141131286-141157021 protein_coding
ENSMUST00000172479 (Ptdss2-009) 141130278-141152823 nonsense_mediated_decay
ENSMUST00000172787 (Ptdss2-003) 141130256-141152991 protein_coding
ENSMUST00000173572 (Ptdss2-007) 141132553-141143671 processed_transcript
ENSMUST00000173721 (Ptdss2-008) 141131344-141143642 processed_transcript
ENSMUST00000174058 (Ptdss2-004) 141131356-141143142 nonsense_mediated_decay
ENSMUST00000174373 (Ptdss2-006) 141122382-141154456 nonsense_mediated_decay
ENSMUST00000174612 (Ptdss2-005) 141132438-141147113 nonsense_mediated_decay
ENSMUST00000174706 (Ptdss2-002) 141131301-141154323 retained_intron
ENSMUSG00000054662 (Ano9)
anoctamin 9 		ENSMUST00000067836 (Ano9-201) 141101219-141117806 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UP_0001ENSG00000174915ENST00000308020ENST00000525059ENST00000525727ENST00000526558ENST00000526878ENST00000527325ENST00000527479ENST00000528617ENST00000530029ENST00000530087ENST00000531411ENST00000531520ENST00000532614ENSG00000185101ENST00000332826ENST00000524802ENST00000525804ENST00000525857ENST00000526142ENST00000528927ENST00000532094ENST00000534161ENSG00000243562ENST00000481676ENSG00000255237ENST00000525893CIL_0002UP_0002ENSMUSG00000025495ENSMUST00000026568ENSMUST00000172479ENSMUST00000172787ENSMUST00000173572ENSMUST00000173721ENSMUST00000174058ENSMUST00000174373ENSMUST00000174612ENSMUST00000174706ENSMUSG00000054662ENSMUST00000067836
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UP_0001ENSG00000174915ENST00000308020ENST00000525059ENST00000526878ENST00000527325ENST00000528617ENST00000531520ENST00000532614ENSG00000185101ENST00000332826ENST00000524802ENST00000526142ENST00000528927ENST00000532094ENST00000534161ENSG00000243562ENST00000481676ENSG00000255237ENST00000525893CIL_0002UP_0002ENSMUSG00000025495ENSMUST00000026568ENSMUST00000174373ENSMUST00000174706ENSMUSG00000054662ENSMUST00000067836
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000174915 ENST00000308020 5.217±0.00 6.357±0.00 1.231±0.00 8.523±0.00 8.226±0.00 6.881±0.00 5.992±5.26 14.493±0.00 2.688±2.38 5.293±4.42 5.554±3.50 9.335±7.71 12.289±3.02 25.572±8.81
ENST00000525059 N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A N/A N/A N/A N/A
ENST00000525727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526878 N/A N/A N/A N/A 0.117±0.00 N/A N/A 0.039±0.00 0.184±0.00 N/A N/A N/A N/A N/A
ENST00000527325 N/A N/A 1.601±0.00 N/A N/A 0.851±0.00 N/A 0.895±0.00 N/A N/A N/A 11.677±0.00 6.388±0.00 43.993±0.00
ENST00000527479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528617 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.245±0.00 N/A N/A N/A N/A
ENST00000530029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531520 N/A N/A N/A N/A N/A 1.007±0.00 1.256±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000532614 N/A N/A N/A N/A 1.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185101 ENST00000332826 N/A 3.892±0.00 N/A N/A 1.456±0.00 2.056±0.00 0.097±0.00 1.915±0.00 0.467±0.00 N/A N/A 5.777±5.41 0.150±0.13 0.430±0.00
ENST00000524802 0.237±0.00 N/A N/A 0.106±0.00 N/A 1.134±0.00 0.070±0.00 N/A N/A 1.800±0.00 N/A N/A N/A N/A
ENST00000525804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526142 0.147±0.00 3.900±0.00 N/A N/A N/A 1.000±0.00 N/A 1.433±0.00 0.094±0.00 0.536±0.00 N/A 8.559±1.95 0.068±0.00 0.217±0.00
ENST00000528927 N/A N/A N/A N/A 0.196±0.00 0.299±0.00 N/A N/A N/A N/A N/A N/A N/A 0.186±0.00
ENST00000532094 0.018±0.00 2.706±0.00 N/A N/A N/A 0.344±0.02 0.024±0.00 N/A 0.024±0.00 0.221±0.00 N/A 2.241±0.00 0.033±0.00 N/A
ENST00000534161 N/A N/A N/A N/A 0.163±0.00 0.346±0.00 N/A 1.458±0.00 N/A N/A N/A 9.916±0.00 0.105±0.00 0.489±0.00
ENSG00000243562 ENST00000481676 N/A 0.320±0.00 N/A 0.185±0.00 0.087±0.00 N/A N/A 0.171±0.00 N/A N/A N/A 0.549±0.20 N/A 0.159±0.01
ENSG00000255237 ENST00000525893 0.228±0.00 0.972±0.00 0.068±0.00 0.215±0.18 0.349±0.00 0.299±0.00 0.086±0.00 0.241±0.00 0.157±0.00 0.106±0.00 0.183±0.00 0.472±0.30 0.268±0.12 0.561±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025495 ENSMUST00000026568 11.211±1.53 23.714±2.21 7.549±1.30 11.353±3.78 12.021±3.91 14.085±3.75 5.040±1.60 22.129±8.47 15.703±14.55 9.210±3.28 4.338±1.15 20.845±8.75 16.619±6.38 69.433±38.79
ENSMUST00000172479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174373 N/A N/A N/A N/A N/A N/A 4.894±0.00 N/A N/A N/A N/A 5.644±0.00 N/A N/A
ENSMUST00000174612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174706 4.493±0.26 9.930±2.55 2.059±0.44 4.028±0.14 N/A 4.042±0.20 N/A N/A 6.950±2.47 2.225±0.00 0.798±0.00 6.900±2.54 N/A N/A
ENSMUSG00000054662 ENSMUST00000067836 0.905±0.97 0.056±0.03 1.771±0.66 0.009±0.00 2.292±1.14 21.767±2.74 0.058±0.02 1.189±0.51 0.577±1.04 1.037±0.51 0.137±0.06 0.655±0.25 1.933±2.05 0.124±0.06

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