C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA-binding region (RNP1, RRM) containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527062 RNPC3-005 ENSG00000185946 9606 + 1:103525757-103541475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000527062
Transcript ID Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000527062 36.069±0.00 14.866±0.00 8.090±0.00 15.939±0.00 20.458±0.00 5.812±0.00 4.878±0.00 5.695±0.00 18.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072Z CIL_00072Z_0002 CGP 1:102876467-103555239

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106535 Rnpc3-002 protein_coding Mus_musculus 0 833
ENSMUST00000106536 Rnpc3-003 protein_coding Mus_musculus 0 833
ENSMUST00000092154 Rnpc3-001 protein_coding Mus_musculus 0 833
ENSMUST00000153853 Rnpc3-005 protein_coding Mus_musculus 0 833
ENSMUST00000123232 Rnpc3-006 processed_transcript Mus_musculus 0 549
ENSMUST00000135712 Rnpc3-007 processed_transcript Mus_musculus 0 379

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