C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin-linked kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527121 ILK-008 ENSG00000166333 9606 + 11:6603782-6609393 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverLungMusclePlacentaENST00000527121
Transcript ID Colon Heart Liver Lung Muscle Placenta
ENST00000527121 6.357±0.00 3.415±0.00 11.316±0.00 4.209±0.00 4.800±0.00 24.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HZ CIL_0001HZ_0001 CGP 11:6595075-6610874
CIL_0003X8 CIL_0003X8_0001 CGP 11:6603708-6612667

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163389 Ilk-201 protein_coding Mus_musculus 0 880
ENSMUST00000033182 Ilk-001 protein_coding Mus_musculus 0 880
ENSMUST00000148971 Ilk-007 retained_intron Mus_musculus 0 861
ENSMUST00000120029 Gm6263-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000154626 Ilk-005 retained_intron Mus_musculus 0 737
ENSMUST00000127298 Ilk-008 protein_coding Mus_musculus 0 651
ENSMUST00000136687 Ilk-004 protein_coding Mus_musculus 0 628
ENSMUST00000145123 Ilk-006 retained_intron Mus_musculus 0 392
ENSMUST00000149695 Ilk-002 retained_intron Mus_musculus 0 351
ENSMUST00000153557 Ilk-003 retained_intron Mus_musculus 0 272
ENSMUST00000141116 Taf10-001 protein_coding Mus_musculus 0 231
ENSMUST00000151108 Ilk-009 retained_intron Mus_musculus 0 222
ENSMUST00000152508 Ilk-011 retained_intron Mus_musculus 0 206
ENSMUST00000098148 Rrp8-002 protein_coding Mus_musculus 9.99967e-42 174

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