C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin linked kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163389 Ilk-201 ENSMUSG00000030890 10090 + 7:105736725-105742925 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryPlacentaENSMUST00000163389
Transcript ID Bladder Ovary Placenta
ENSMUST00000163389 44.809±5.14 61.828±10.51 49.592±2.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001I3 CIL_0001I3_0002 CGP 7:105640562-105737376
CIL_0001HZ CIL_0001HZ_0002 CGP 7:105732207-105742925
CIL_0003X8 CIL_0003X8_0002 CGP 7:105736592-105744361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001658 IDA branching involved in ureteric bud morphogenesis
GO:0004674 ISO protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005886 IEA plasma membrane
GO:0005925 ISA focal adhesion
GO:0007229 ISO integrin-mediated signaling pathway
GO:0008284 IMP positive regulation of cell proliferation
GO:0010761 IMP fibroblast migration
GO:0014044 IMP Schwann cell development
GO:0018105 IMP peptidyl-serine phosphorylation
GO:0021675 IMP nerve development
GO:0022011 IMP myelination in peripheral nervous system
GO:0030027 IDA lamellipodium
GO:0030030 IMP cell projection organization
GO:0030513 IMP positive regulation of BMP signaling pathway
GO:0043491 IMP protein kinase B signaling
GO:0045197 IMP establishment or maintenance of epithelial cell apical/basal polarity
GO:0045669 IMP positive regulation of osteoblast differentiation
GO:2000178 IGI negative regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299421 ILK-001 protein_coding Homo_sapiens 0 2211
ENST00000299424 TAF10-001 protein_coding Homo_sapiens 0.0000005 60
ENST00000396751 ILK-003 protein_coding Homo_sapiens 0 2211
ENST00000420936 ILK-002 protein_coding Homo_sapiens 0 2143
ENST00000524735 ILK-012 processed_transcript Homo_sapiens 0 261
ENST00000526114 ILK-009 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000526318 ILK-013 protein_coding Homo_sapiens 0 433
ENST00000526711 ILK-006 nonsense_mediated_decay Homo_sapiens 0 1816
ENST00000527121 ILK-008 nonsense_mediated_decay Homo_sapiens 0 880
ENST00000527248 TAF10-004 protein_coding Homo_sapiens 0.000007 55
ENST00000528784 ILK-011 retained_intron Homo_sapiens 0 1094
ENST00000528995 ILK-005 protein_coding Homo_sapiens 0 1297
ENST00000530016 ILK-007 retained_intron Homo_sapiens 0 1146
ENST00000532063 ILK-201 protein_coding Homo_sapiens 0 1816
ENST00000534565 ILK-010 processed_transcript Homo_sapiens 1.99965e-42 176
ENST00000534706 ILK-014 processed_transcript Homo_sapiens 0 435
ENST00000537806 ILK-004 protein_coding Homo_sapiens 0 1483
ENST00000616342 TAF10-002 retained_intron Homo_sapiens 0 521

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