C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527302 RPS2-007 ENSG00000140988 9606 - 16:1962552-1964806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLungMuscleOvaryENST00000527302
Transcript ID Bladder Breast Colon Heart Lung Muscle Ovary
ENST00000527302 7.203±0.00 14.217±0.00 20.844±0.00 4.558±0.00 11.892±0.00 23.780±0.00 26.070±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0015935 IEA small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 516
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 516
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 503
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 0 244
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 2e-38 163
ENSMUST00000152407 Rps2-003 protein_coding Mus_musculus 0 749
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 750
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 750
ENSMUST00000129984 Rps2-007 retained_intron Mus_musculus 0 398
ENSMUST00000122809 Rps2-004 retained_intron Mus_musculus 2e-34 150
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 749
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 749

Loading