C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinoblastoma-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527999 RBL1-003 ENSG00000080839 9606 - 20:37068087-37095995 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZW CIL_0004ZW_0001 CGP 20:36890229-37095995
CIL_0004XV CIL_0004XV_0001 CGP 20:36996349-37179588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005667 IEA transcription factor complex
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007049 IEA cell cycle
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124518 Rbl1-002 retained_intron Mus_musculus 0 385
ENSMUST00000154721 Rbl1-003 retained_intron Mus_musculus 0 385
ENSMUST00000029170 Rbl1-001 protein_coding Mus_musculus 0 375

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