C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma-like 1 (p107)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154721 Rbl1-003 ENSMUSG00000027641 10090 - 2:157166978-157204534 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyMuscleOvaryENSMUST00000154721
Transcript ID Adipose Brain Breast Colon Heart Kidney Muscle Ovary
ENSMUST00000154721 0.470±0.00 0.056±0.00 0.508±0.00 1.628±0.00 0.178±0.00 0.592±0.00 0.325±0.00 1.312±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZW CIL_0004ZW_0002 CGP 2:157097533-157204534
CIL_0004XV CIL_0004XV_0002 CGP 2:157145893-157279549

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344359 RBL1-002 protein_coding Homo_sapiens 0 2743
ENST00000373664 RBL1-001 protein_coding Homo_sapiens 0 2752
ENST00000527999 RBL1-003 nonsense_mediated_decay Homo_sapiens 0 385

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