C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma-like 1 (p107)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124518 Rbl1-002 ENSMUSG00000027641 10090 - 2:157174986-157204526 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLungMuscleOvaryTestisENSMUST00000124518
Transcript ID Adrenal Brain Breast Colon Lung Muscle Ovary Testis
ENSMUST00000124518 1.458±0.25 0.246±0.00 1.704±0.00 2.616±0.48 1.054±0.00 0.209±0.06 1.728±0.63 2.252±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZW CIL_0004ZW_0002 CGP 2:157097533-157204534
CIL_0004XV CIL_0004XV_0002 CGP 2:157145893-157279549

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344359 RBL1-002 protein_coding Homo_sapiens 0 2187
ENST00000373664 RBL1-001 protein_coding Homo_sapiens 0 2196
ENST00000527999 RBL1-003 nonsense_mediated_decay Homo_sapiens 0 385

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