C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tryptophan hydroxylase 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000528338  |
TPH1-004 |
ENSG00000129167 |
9606 | - |
11:18029515-18042426  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001IE | CIL_0001IE_0002 | CGP | 11:17788048-18042426 |
| CIL_00041A | CIL_00041A_0002 | CGP | 11:18017564-18106091 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005506 | IEA | iron ion binding |
| GO:0008152 | IEA | metabolic process |
| GO:0009072 | IEA | aromatic amino acid family metabolic process |
| GO:0016597 | IEA | amino acid binding |
| GO:0016714 | IEA | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000170251
|
Tph1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 414 |
|
ENSMUST00000172386
|
Tph1-006 | nonsense_mediated_decay | Mus_musculus | 0 | 414 |
|
ENSMUST00000049298
|
Tph1-002 | protein_coding | Mus_musculus | 0 | 414 |
|
ENSMUST00000107669
|
Tph1-001 | protein_coding | Mus_musculus | 0 | 414 |
|
ENSMUST00000168335
|
Tph1-003 | protein_coding | Mus_musculus | 0 | 335 |
|
ENSMUST00000170045
|
Tph1-008 | retained_intron | Mus_musculus | 0 | 195 |
|
ENSMUST00000163468
|
Tph1-004 | retained_intron | Mus_musculus | 4e-24 | 115 |
