C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tryptophan hydroxylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172386 Tph1-006 ENSMUSG00000040046 10090 - 7:46647426-46665288 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartOvaryPlacentaTestisENSMUST00000172386
Transcript ID Bladder Breast Heart Ovary Placenta Testis
ENSMUST00000172386 0.043±0.01 0.063±0.00 0.045±0.00 0.122±0.03 0.024±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IE CIL_0001IE_0003 CGP 7:46443168-46672537
CIL_00041A CIL_00041A_0003 CGP 7:46647130-46710680

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250018 TPH1-001 protein_coding Homo_sapiens 0 771
ENST00000417164 TPH1-002 nonsense_mediated_decay Homo_sapiens 0 1188
ENST00000525406 TPH1-003 processed_transcript Homo_sapiens 0 252
ENST00000528338 TPH1-004 protein_coding Homo_sapiens 0 414

Loading