C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tryptophan hydroxylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168335 Tph1-003 ENSMUSG00000040046 10090 - 7:46660338-46667343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungOvaryPlacentaTestisENSMUST00000168335
Transcript ID Heart Lung Ovary Placenta Testis
ENSMUST00000168335 0.120±0.10 0.232±0.00 0.072±0.00 1.669±0.00 0.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IE CIL_0001IE_0003 CGP 7:46443168-46672537
CIL_00041A CIL_00041A_0003 CGP 7:46647130-46710680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004510 IDA tryptophan 5-monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0009072 IEA aromatic amino acid family metabolic process
GO:0016597 IEA amino acid binding
GO:0045600 IMP positive regulation of fat cell differentiation
GO:0046849 IGI bone remodeling
GO:0055114 IEA oxidation-reduction process
GO:0060749 IMP mammary gland alveolus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250018 TPH1-001 protein_coding Homo_sapiens 0 335
ENST00000417164 TPH1-002 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000528338 TPH1-004 protein_coding Homo_sapiens 0 335

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