C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: upstream binding transcription factor, RNA polymerase I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529373 UBTF-011 ENSG00000108312 9606 - 17:44209435-44211002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverLungPlacentaENST00000529373
Transcript ID Bladder Breast Colon Liver Lung Placenta
ENST00000529373 5.670±0.00 14.329±0.00 6.039±0.00 5.815±0.00 9.194±0.00 21.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0004D4 CIL_0004D4_0002 CGP 17:44191805-44221626
CIL_0004D5 CIL_0004D5_0002 CGP 17:44205033-44268141

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178839 Ubtf-201 protein_coding Mus_musculus 0 832
ENSMUST00000173870 Ubtf-007 protein_coding Mus_musculus 0 832
ENSMUST00000107123 Ubtf-011 protein_coding Mus_musculus 0 832
ENSMUST00000107119 Ubtf-008 protein_coding Mus_musculus 0 832
ENSMUST00000006754 Ubtf-001 protein_coding Mus_musculus 0 832
ENSMUST00000107117 Ubtf-003 protein_coding Mus_musculus 0 832
ENSMUST00000107115 Ubtf-005 protein_coding Mus_musculus 0 832
ENSMUST00000079589 Ubtf-006 protein_coding Mus_musculus 0 832
ENSMUST00000174302 Ubtf-002 protein_coding Mus_musculus 0 832
ENSMUST00000174726 Ubtf-010 retained_intron Mus_musculus 0 392

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