| Transcript ID | Liver |
|---|---|
| ENSMUST00000107115 | 8.272±3.68 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | upstream binding transcription factor, RNA polymerase I | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000107115  |
Ubtf-005 |
ENSMUSG00000020923 |
10090 | - |
11:102305924-102316704  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B6 | CIL_0009B6_0002 | VISTA | 11:102063033-102664797 |
| CIL_0004D4 | CIL_0004D4_0003 | CGP | 11:102289300-102319742 |
| CIL_0007ST | CIL_0007ST_0002 | VISTA | 11:102292756-102896210 |
| CIL_0004D5 | CIL_0004D5_0003 | CGP | 11:102304560-102366203 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000183 | IMP | chromatin silencing at rDNA |
| GO:0005515 | IPI | protein binding |
| GO:0005730 | IDA | nucleolus |
| GO:0006362 | IDA | transcription elongation from RNA polymerase I promoter |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000141757
|
ubtfl-010 | protein_coding | Danio_rerio | 2e-25 | 122 |
|
ENSDART00000136758
|
ubtfl-008 | protein_coding | Danio_rerio | 3e-18 | 99 |
|
ENSDART00000056634
|
ubtfl-001 | protein_coding | Danio_rerio | 3e-18 | 99 |
|
ENSDART00000144758
|
ubtfl-009 | protein_coding | Danio_rerio | 0.00000000000002 | 86 |
|
ENST00000302904
|
UBTF-002 | protein_coding | Homo_sapiens | 0 | 2346 |
|
ENST00000343638
|
UBTF-001 | protein_coding | Homo_sapiens | 0 | 3413 |
|
ENST00000393606
|
UBTF-004 | protein_coding | Homo_sapiens | 0 | 3075 |
|
ENST00000428234
|
UBTFL11-001 | processed_pseudogene | Homo_sapiens | 0 | 532 |
|
ENST00000436088
|
UBTF-005 | protein_coding | Homo_sapiens | 0 | 2065 |
|
ENST00000526094
|
UBTF-007 | protein_coding | Homo_sapiens | 0 | 3068 |
|
ENST00000527034
|
UBTF-014 | protein_coding | Homo_sapiens | 0 | 3319 |
|
ENST00000529042
|
UBTF-010 | retained_intron | Homo_sapiens | 0 | 300 |
|
ENST00000529373
|
UBTF-011 | protein_coding | Homo_sapiens | 0 | 832 |
|
ENST00000529383
|
UBTF-008 | protein_coding | Homo_sapiens | 0 | 1977 |
|
ENST00000530828
|
UBTF-009 | protein_coding | Homo_sapiens | 0 | 466 |
|
ENST00000531368
|
UBTF-012 | retained_intron | Homo_sapiens | 0 | 440 |
|
ENST00000533177
|
UBTF-006 | protein_coding | Homo_sapiens | 0 | 3341 |
|
ENST00000537550
|
UBTF-015 | processed_transcript | Homo_sapiens | 0 | 798 |
